The MBA and MSc Biotechnology both are good courses and provide lots of employment opportunities.

You can choose one of these courses according to your interests and background. If you want to make your career in research than you must go for Msc or if you have interest in management field then MBA course is good for you.

According to me MBA Biotechnology is a good option and provide good opportunities rather then M. sc.

For your reference here I am giving you the list of some good MBA Biotechnology colleges in India:

Amity Institute of Biotechnology
'A' Block, Amity Campus, Sector-125, Expressway
Noida, Uttar Pradesh
(0120) 24392195
(0120) 4392225

Amity University
Amity Delhi/Noida Campus Block J2, Ground Floor Sector- 125,
Noida, Uttar Pradesh
(0751) 3290666, 3290667
8349994630, 8349994631

Bharati Vidyapeeth University
Lal Bahadur Shastri Marg
Pune, Maharashtra
(020) 24407106, 24407114
(020) 24339121, 24321910

Captain Awadhesh Pratap Singh University Rewa, Madhya Pradesh
(08662) 511950, 230819, 230050, 230294

Global Business School and Research Centre Mumbai- Bangalore Highway, Tathawade
Pune, Maharashtra
(020) 22932132
9860650707

Gurukul Institute of Management and Technology C 9/7, Sector- 7, Rohini
Delhi, Delhi
(011) 47008408

Institute of Management and Entrepreneurship Development (IMED)
Erandwane Campus, Paud Road,
Pune, Maharashtra
(020) 25431060
(020) 25431060

Jagdishprasad Jhabarmal Tibrewala University (JJTU)
Vidyanagari, Churu - Jhunjhunu Road,
Juhnjhunun, Rajasthan
(01595) 513006
9820870624, 9820520108

Mangalayatan University
33rd Milestone, Aligarh-Mathura Highway, Beswan
Aligarh, Uttar Pradesh
(05722) 272100
9319222222, 9319888888
(05722) 254220

Nimbus School of Technology Management
Plot No. 3, Sector-8 Vikas Nagar
Lucknow, Uttar Pradesh
(0522) 4001104

NorthPole Institute of Distance Education B/610, Pramukh swami Arcade Malaviya Chowk Yagnik Road, Near Shastri Ground,
Rajkot, Gujarat
(0281) 6560541
9227007707, 8511105131, 9824360534

Padmashree Dr. D.Y. Patil University
Sector 15, Plot No. 50, CBD Belapur, Navi Mumbai
Mumbai, Maharashtra
(022) 39285999
9820566202
(022) 39286197

Panjab University (PU)
Sector 14
Chandigarh, Chandigarh
(0172) 2534575, 2541945 (Toll Free No. 1800-180-2065)
(0172) 2534031, 2534032, 2541022

Shoolini University
Bajhol, Solan-Oachghat-Kumarhatti Highway
Solan, Himachal Pradesh
9625233301, 9625233305

Sri Guru Granth Sahib World University Fatehgarh Sahib, Punjab
(01763) 232300, 232325, 232311
9592507888, 8437015109
(01763) 232324, 233311

Swami Vivekanand Institute of Information Technology (SVIIT)
Chandigarh - Patiala Highway, Ramnagar - Banur, Tehsil - Rajpura
Patiala, Punjab
(01762) 507000, 507888, 507222
(01762) 507333

The Global Open University
Opposite Railway Station
Dimapur, Nagaland
(03862) 231959, 283526
(03862) 231959

Tilak Maharastra Vidyapeeth
Vidyapeeth Bhavan, Gultekadi
Pune, Maharashtra
(020) 24261856, 24264699, 24267888
(020) 24266068, 24271695